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Image by Markus Spiske

Code & Data Resources

Our group works through advanced analytical techniques for all steps of our project. While most of our analysis is not yet available, we have included resources for some of our data projects and common R scripts. If you are interested in one of our projects, please reach out to the contact on the About page.

GitHub Organization: https://github.com/deerdisease

Software developed by our team members:

PmoveSTIR

 Github: GitHub - mqwilber/pmovestir​​

SASSE: Surveillance Analysis and Sample Size Explorer (SASSE)

Github: https://github.com/deerdisease/sasse
RShiny: https://deerdisease.shinyapps.io/Wildlife-surveillance-design-tools/

Code pipeline for simulation disease transmission from animal movement: https://figshare.com/s/cf51816146df7a237b5c?file=53274578

Contact rates for identifying interactions of white-tailed deer in a chronic wasting disease management area: U.S. Geological Survey software release: https://doi.org/10.5066/P14RVZKJ

Data and code from: Viral outbreak dynamics and evolution in wildlife at the interface with humans [Dataset]: https://doi.org/10.5061/dryad.fbg79cp81

Targeted Surveillance Research Group -- Established 2022

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